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R Error In Function (classes Fdef Mtable)

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Variantannotation Problem Dear All, I have installed VariantAnnotation and I am doing the following to locate variants li... Why is bench pressing your bodyweight harder than doing a pushup? Am I being a "mean" instructor, denying an extension on a take home exam Transpile WordMath Do Esri developer certifications expire? Share a link to this question via email, Google+, Twitter, or Facebook. http://johnlautner.net/error-in/r-error-in-eval-expr-envir-enclos-attempt-to-apply-non-function.html

Why does MIT have a /8 IPv4 block? HTqPCR: qPCRset Dear Maintainer, Last week, I submitted a post to bioconductor. Powered by Biostar version 2.3.0 Traffic: 804 users visited in the last hour Project People Log In | New Account Home MyPage Projects Exiting with error No forum chosen Thanks to: about • faq • rss Community Log In Sign Up Add New Post Question: Error in (function (classes, fdef, mtable): unable to find an inherited method for function ‘annotation’ for signature https://github.com/joey711/phyloseq/issues/147

Error In (function (classes, Fdef, Mtable) : Unable To Find An Inherited Method For Function

Thanks :) Owner joey711 commented Sep 30, 2012 You have to have a tree to plot a tree. In particular, in the beadarray package, you would use readBeadSummaryData() followed by rankInvariantNormalise() to accomplish the task you stated in your email. Error in (function (classes, fdef, mtable): unable to find an inherited method for function ‘annotation’ for signature ‘"character" insilicomerging • 4.8k views ADD COMMENT • link • Not following Follow via

Browse other questions tagged r or ask your own question. For example, this code: library("RSQLite") con = dbConnect(drv="SQLite", dbname="database.db") Generates this warning: unable to find an inherited method for function ‘dbConnect’ for signature ‘"character"’ And after fixing that error, this code: Tips for dexterously handling bike lights with winter gloves Is cheese seasoned by default? pd <- r...

more stack exchange communities company blog Stack Exchange Inbox Reputation and Badges sign up log in tour help Tour Start here for a quick overview of the site Help Center Detailed Unable To Find An Inherited Method For Function Summary rasters1 <- list.files("F:\\MOD15A2_LAI_1km\\MOD15A2_LAI_2009", pattern = "mod15a2.a2009001.*.005.*.img$", full.names = TRUE, recursive = TRUE) mos1 <-mosaic(rasters1, fun=mean) It was reporting error as below Error in (function (classes, fdef, mtable) : unable to find The tree file seems to be correct as I could plot the tree using the ade package. directory joey711 closed this Sep 30, 2012 tboonf commented Sep 30, 2012 Problem is not resolved, unfortunately.

Not the answer you're looking for? r xlconnect share|improve this question edited Oct 27 '14 at 16:42 asked Oct 27 '14 at 12:31 Ahmed Salhin 546522 It would be very helpful to post a link Shh! You could inspect the code of the function "normalize.AffyBatch.invariantset" (by simply typing its name into the command line) to see what it does and how you would interface to normalize.invariantset.

Unable To Find An Inherited Method For Function Summary

S3 is the most commonly used, with S4 probably next most frequently used. How are beats formed when frequencies combine? Error In (function (classes, Fdef, Mtable) : Unable To Find An Inherited Method For Function Using script that posted in http://stackoverflow.com/questions/15287807/how-can-i-create-raster-mosaic-using-list-of-rasters But, I have received a warning message and error message. Functions in the phyloseq package that are going to do something with a tree require that a tree already be calculated, and that the tree is a "phylo"-class, as defined by

I am trying to create an expression set object..here is what i did so far.. more stack exchange communities company blog Stack Exchange Inbox Reputation and Badges sign up log in tour help Tour Start here for a quick overview of the site Help Center Detailed Could a microorganism possess intelligence? Name: not available Url: https://stat.ethz.ch/pipermail/bioconductor/attachments/20080324/ 9c516421/attachment.pl ADD REPLY • link written 8.7 years ago by Suprabhath Reddy Gajjala • 20 Please log in to add an answer.

Is it possible to return an object of type T by reference from a lambda without using trailing return type syntax? The code is below, b... How bad is it to have multiple devices with the same SSH server keys? I will follow the instruction and make a new post in case of facing an error.   ADD REPLY • link modified 5 months ago • written 5 months ago by

I think you need to do something more like this: mydrv <- dbDriver("SQLite"); con <- dbConnect(drv=mydrv, ...) –Josh O'Brien Apr 29 at 16:54 | show 1 more comment 1 Answer 1 Powered by Biostar version 2.2.0 Traffic: 109 users visited in the last hour sign up / log in • about • faq • rss Ask Question Latest 200 News Jobs And the error from applying rotate to x would be fixed (for example) by change the type of x to some type on which rotate was defined? –user12341234 Apr 29 at

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Your Answer draft saved draft discarded Sign up or log in Sign up using Google Sign up using Facebook Sign up using Email and Password Post as a guest Name RMA problem in affy package Hello, I wrote following R code to analyze affymeterix microarray data  library(BiocGenerics) ... What is this strange biplane jet aircraft with tanks between wings? Browse other questions tagged topic-modeling or ask your own question.

These collected intensity values need to be > normalized(Rank Invariant Normalization) by using the R function > "normalize.AffyBatch.invariantset()". > > Since the normalize.AffyBatch.invariantset() method requires the input > argument to be Rank invariant normalization has some drawbacks, the largest one, in my opinion, being the generation of negative values. Am I being a "mean" instructor, denying an extension on a take home exam Is cheese seasoned by default? Fasta File For Exomedepth And Cnv Calling Hello, I have a problem using ExomeDepth with a referenceFASTA file.

a question about using GEOquery Hello, I used GEOquery to get GEOdata, but Meta() function didn't work. varianceStabilizingTransformation() of FPKM data, count data unavailable Hi BioStars, New to the bioinformatics community here and I have a question about how to do diff... How to decrypt .lock files from ransomeware on Windows Did Bard ride the cart in the novel? Hi John -- "John Cumbers" writes: > Hello, > I'm stuck trying to combine two different s...